Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911574.1_cds_XP_016461561.1_54874
CDS Infomation

[gene=LOC107784887] [db_xref=GeneID:107784887] [protein=COP9 signalosome complex subunit 2-like] [protein_id=XP_016461561.1] [location=complement(join(38382..38472,38561..38793,39730..39805,39911..40042,40197..40265,40756..40943,41631..41765,41849..41923,42030..42270,43080..43158,49871..49963,50081..50090))] [gbkey=CDS]
Sequence

ATGGGTTCTGATGCGGATATGGAGGATTATGGATTCGAGTACTCGGATGAGGAGCCCGAA
GAGCAGGATGTTGATATTGAGAACCAATACTACAACTCCAAAGGCTTGGTTGAAACAGAA
CCGGAGGCAGCACTTGAGGGTTTTGCTGAAGTAGTTCGTATGGAACCTGAGAAGGCTGAG
TGGGGATTCAAAGCTTTAAAGCAAACTGTTAAGCTTTACTATAAGCTTGGGAAGTACAAG
GAAATGATGGATGCTTACAGAGAGATGCTAACCTACATTAAATCAGCAGTGACAAGAAAT
TATAGTGAGAAGTGTATTAACAATATCATGGATTTCGTCTCTGGATCAGCTAGTCAGAAC
TTCAGCCTCCTACAAGAGTTCTACGAGACAACATTGAAAGCCCTTGAAGAGGCAAAGAAT
GAGAGGTTGTGGTTCAAGACAAACCTAAAGCTTTGCAAAATTTGGTTTGACATTGGGGAA
TATGGGCGAATGAGTAAGATTTTGAAAGAACTCCACAAGTCTTGTCAAAAAGAAGATGGC
ACTGATGATCAGAAGAAAGGTACGCAGTTGTTGGAGGTGTATGCAATTGAGATCCAAATG
TATACGGAGACGAAAAATAACAAAAAACTGAAGGAGCTATACAACAAAGCACTTTCAGTC
AAGTCGGCGATTCCTCACCCAAGAATAATGGGAATAATTCGTGAATGTGGAGGAAAAATG
CATATGGCAGAGCGGCAGTGGGCAGAGGCAGCTACAGACTTCTTTGAAGCTTTCAAGAAC
TATGATGAAGCCGGGAATCAGAGGCGCATCCAGTGTCTAAAGTACTTGGTTCTGGCAAAT
ATGCTGATGGAGTCTGAGGTAAACCCTTTCGATGGCCAAGAAGCAAAACCCTACAAAAAT
GACCCTGAAATACTTGCAATGACAAATCTTATAGCAGCATATCAACGAAATGAGATCTTG
GAGTTTGAGAAAATTCTGAAGGTGCGGCTATTAGAATATTGCTTCTATAAGTCCTTCAAT
TTATGGGATAATGGTGGTGTACCACTTAGGGCTGGCAAAAATGGCCCAAGGCCGCCCAAC
CCGCCCAATATTTCATGGCCAGGCATATTCTCGTTGGTTCTTATAAGTATCCATCGTCTT
GTGCTTTATCATGAACTATTGTTACTAAGCTGTGCGTGTAATAGAATTCCTAATTGGCTG
CTATTACCTAACATGCAGGAGCTTAATGTGCCAGAAAAAGACGTTGAGGAGTTGTTGGTA
TCACTGATCTTGGACAACCGTATCCATGGGCACATTGATCAAGTGAACCGGTTGCTAGAG
TGTGGAGACAGATCGAAAGGAATGAAAAAATACGCTGCCATTGACAAATGGAACACACAA
CTAAAGTCACTATACCAAACCGTTGGCAACAGAGTATGCTGA

Peptide Sequence

PEP ID

XP_016461561.1
PEP Infomation

PREDICTED: COP9 signalosome complex subunit 2-like [Nicotiana tabacum]
Sequence

MGSDADMEDYGFEYSDEEPEEQDVDIENQYYNSKGLVETEPEAALEGFAEVVRMEPEKAE
WGFKALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN
FSLLQEFYETTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMSKILKELHKSCQKEDG
TDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYNKALSVKSAIPHPRIMGIIRECGGKM
HMAERQWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
DPEILAMTNLIAAYQRNEILEFEKILKVRLLEYCFYKSFNLWDNGGVPLRAGKNGPRPPN
PPNISWPGIFSLVLISIHRLVLYHELLLLSCACNRIPNWLLLPNMQELNVPEKDVEELLV
SLILDNRIHGHIDQVNRLLECGDRSKGMKKYAAIDKWNTQLKSLYQTVGNRVC

Transcript Sequence

Gene sequence data has not been registered.